PATO is an ontology of phenotypic qualities, intended for use in a number of applications, primarily defining composite phenotypes and phenotype annotation, available at http://obofoundry.org/wiki/index.php/PATO:Main_Page.
Announcement
Directory
Genetics Ontology Lite
RIKENBASE
Basic Formal Ontology 1.1.1
CHEBI Chemical entities of biological interest
PATO
Obsolete
pato
value
assay
absolute activity
process
relative activity
absolute speed
relative speed
absolute age
relative age
gametophytic compatability
relative compatability
sporophytic compatability
carbohydrate composition
electrolyte composition
macromolecular composition
protein composition
enzyme composition
metabolite composition
secondary product composition
protein concentration
carbohydrate concentration
water content
gel consistency
absolutedistance
relative distance
absolute frequency
relative frequency
absolute number
relative number
parental quality
relative pattern
percentage
absolute percentage
relative percentage
relative pilosity
relative_quality
shattering
threshability
regulation
absolute rhythym
relative rhythym
absolute sensitivity
disease sensitivity
absolute disease sensitivity
relative disease sensitivity
relative sensitivity
stress sensitivity
abiotic stress sensitivity
chemical sensitivity
drug sensitivity
absolute drug sensitivity
relative drug sensitivity
herbicide sensitivity
insecticide sensitivity
plant growth hormone sensitivity
soil composition sensitivity
soil nutrient sensitivity
macronutrient sensitivity
micronutrient sensitivity
osmotic response sensitivity
p h sensitivity
acid sensitivity
alkali sensitivity
salt sensitivity
water sensitivity
drought sensitivity
flooding sensitivity
humidity sensitivity
radiation sensitivity
temperature sensitivity
absolute temperature sensitivity
relative temperature sensitivity
absolute size
absolute height
relative height
absolute length
relative length
absolute mass
relative mass
absolute weight
relative weight
relative size
absolute_angle
relative_angle
absolute orientation
relative orientation
substance
addictive substance
solid substance
liquid substance
absolute temperature
body temperature
relative temperature
relative texture
absolute threshold
pain threshold
relative threshold
absolute temporal
absolute incidence
relative incidence
absolute rate
relative rate
relative temporal
absolute time
bouts
relative time
yield
absolute yield
relative yield
function
autonomic function
behavioral function
metabolic function
physiological function
relative function
body position
body tone
piloerection
abdominal tone
limb tone
arousal
consumption quality
gait
learning_and memory
locomotor_activity
mating
spontaneous_activity
startle response
vocalization
transfer_arousal
absolute consumption
relative consumption
learning
memory
long term memory
short term memory
absolute locomotor_activity
relative locomotor_activity
enzyme function
circulatory function
defensive function
digestive function
excretory function
muscle function
neural function
neurobehavioral function
reproductive function
respiratory function
heart rate
immune function
repair function
healing
regeneration
urination
muscle elevation
muscle strength
motor function
sensory function
tactile response
motor performance
auditory
olfactory
proprioreception
reflex
taste
touch
visual
odor_acuity
odor type
absolute odor_acuity
relative odor_acuity
blinking reflex
contact righting reflex
corneal reflex
flinch reflex
lordosis reflex
ocular reflex
pinna reflex
postural reflex
proboscis extension reflex
pupillary reflex
righting reflex
spinal reflex
startle reflex
suckling reflex
swallowing reflex
vibrissae reflex
taste_acuity
taste type
absolute taste_acuity
relative taste_acuity
visual_ability
visual_acuity
visual placing
visual threshold
absolute visual_ability
relative visual_ability
absolute visual_acuity
relative visual_acuity
absolute visual threshold
relative visual threshold
defecation
prepulse inhibition
relative neurobehavioral function
gestational period
hybrid fertility
backcross fertility
cytoplasmic sterility
f1 fertility
f2 fertility
germ line dependent fertility
soma dependent fertility
cytoplasmic male sterility
absolute litter size
relative litter size
respiratory rate
absolute respiratory rate
relative respiratory rate
mobility value
absolute activity value
process value
relative activity value
speed value
not arrested value
absolute speed value
relative speed value
age value
absolute age value
relative age value
color value
color hue value
color intensity value
color saturation value
flourescence value
color pattern value
relative color value
bright
dim
absolute odor_acuity
variegated
compatability value
gametophytic compatability value
relative compatability value
sporophytic compatability value
gametophyte compatible value
gametophyte incompatible value
sporophyte compatible value
sporophyte incompatible value
composition value
carbohydrate composition value
electrolyte composition value
macromolecular composition value
metabolite composition value
secondary product composition value
protein composition value
enzyme composition value
concentration value
protein concentration value
sugar concentration value
water content value
consistency value
gel consistency value
direction value
away
bi-directional
towards1
unidirectional
distance value
absolute distance value
relative distance value
flavor value
frequency value
absolute frequency value
relative frequency value
gender value
hardness value
intensity value
extreme
intense
limited
maximal
slight
vigorous
life span value
morphology value
shape value
proprioreception
count value
absolute number value
relative number value
nutritional value
occurence value
continual
speed value
unique
odor value
parental type value
paternal
maternal
pattern value
concrete
sleep pattern value
perseverative
insomnia
narcolepsy
percentage value
relative percentage value
absolute percentage value
decreased percentage
high percentage
increased percentage
low percentage
pilosity value
relative pilosity value
abstract
deviation(from_normal) value
presence value
relative quantity value
marked
none
relative speed value
high
low
quality value
relative_quality value
shattering value
threshability value
bad value
good value
poor value
regulation value
positive regulation
negative regulation
response value
tactile hyperresponsive
tactile hyporesponsive
mild response
moderate response
vigorous response
rhythym value
sensitivity value
absolute rhythym value
amplitude value
period value
persistence value
phase value
relative rhythym value
absolute sensitivity value
disease sensitivity value
relative sensitivity value
stress sensitivity value
temperature sensitivity value
absolute disease sensitivity value
relative disease sensitivity value
intolerant value
abiotic stress sensitivity value
chemical sensitivity value
humidity sensitivity value
radiation sensitivity value
drug sensitivity value
herbicide sensitivity value
insecticide sensitivity value
plant growth hormone sensitivity value
soil composition sensitivity value
absolute drug sensitivity value
relative drug sensitivity value
drug insensitive
drug sensitive
soil nutrient sensitivity value
macronutrient sensitivity value
micronutrient sensitivity value
osmotic response sensitivity
p h sensitivity value
salt sensitivity value
water sensitivity value
acid sensitivity value
alkali sensitivity value
drought sensitivity value
flooding sensitivity value
photosensitivity value
absolute photosensitivity value
light intensivity sensitivity value
light_quality sensitivity value
relative photosensitivity value
blue light sensitivity value
far red light sensitivity value
red light sensitivity value
u v light sensitivity value
absolute temperature sensitivity value
relative temperature sensitivity value
cold sensitive
heat sensitive
thermoinsensitive
thermosensitive
size value
absolute size value
height value
length value
mass value
relative size value
thickness value
volume value
width value
absolute height value
relative height value
absolute length value
relative length value
absolute mass value
relative mass value
weight value
absolute weight value
relative weight value
absolute thickness value
relative thickness value
absolute volume value
relative volume value
absolute width value
relative width value
spatial value
angle value
closure value
orientation value
placement value
absolute angle value
relative angle value
absolute orientation value
relative orientation value
structure value
deposition defective
substance value
addictive substance value
alcochol value
amphetamine value
time_quantity
length_quantity
metamphetamine value
temparature_quantity
angle_quantity
solid substance value
volume_quantity
occurrent
substance_quantity
energy_quantity
liquid substance value
mass_quantity
concentration_unit
saccharin versus water value
water value
unit
temperature value
absolute temperature value
body temperature value
relative temperature value
temporal value
absolute temporal value
incidence value
rate value
relative temporal value
absolute incidence value
relative incidence value
absolute rate value
relative rate value
late
texture value
relative texture value
floury
glutinous
threshold value
absolute threshold value
pain threshold value
relative threshold value
time value
absolute time value
bouts value
relative time value
latency value
viability value
yield value
absolute yield value
relative yield value
high yield
low yield
function value
autonomic function value
behavioral function value
metabolic function value
physiological function value
relative function value
body position value
body tone value
piloerection value
abdominal tone value
limb tone value
dysfunctional value
functional value
enzyme function value
absolute enzyme function value
relative enzyme function value
high enzyme function value
low enzyme function value
arousal value
balance value
behavioral quality value
consumption value
coordination value
discrimination value
gait value
learning and memory value
locomotor activity value
mating value
spontaneous activity value
startle response
vocalization value
transfer arousal value
impaired
absolute consumption value
relative consumption value
increased consumption
decreased consumption
bizarre gate
learning value
memory value
long term memory value
short term memory value
absolute locomotor activity value
relative locomotor activity value
circulatory function value
defensive function value
digestive function value
excretory function value
muscle function value
neural function value
neurobehavioral function value
reproductive function value
respiratory function value
heart rate value
immune function value
repair function value
immubocompetent value
immunodeficient value
healing value
regeneration value
urination value
defecation value
muscle elevation value
muscle strength value
motor function value
sensory function value
tactile response value
motor performance value
auditory value
olfactory value
proprioreception value
reflex value
taste value
touch value
visual value
odor acuity value
odor type value
taste acuity value
absolute odor acuity value
relative odor acuity value
anosmia
concentration_quantity
quantity
absolute taste acuity value
relative taste acuity value
taste type value
quinine taste
water taste
visual ability value
visual acuity value
visual threshold value
visual placing value
absolute visual ability value
relative visual ability value
absolute visual acuity value
relative visual acuity value
absolute visual threshold value
relative visual threshold value
auditory acuity value
auditory ability value
auditory threshold value
absolute auditory ability value
relative auditory ability value
absolute auditory acuity value
relative auditory acuity value
absolute auditory threshold value
relative auditory threshold value
auditory acuity
auditory ability
auditory threshold
absolute auditory acuity
relative auditory acuity
absolute auditory ability
relative auditory ability
absolute auditory threshold
relative auditory threshold
blinking reflex value
contact righting reflex value
corneal reflex value
flinch reflex value
lordosis reflex value
ocular reflex value
pinna reflex value
postural reflex value
proboscis extension reflex value
pupillary reflex value
righting reflex value
spinal reflex value
startle reflex value
suckling reflex value
swallowing reflex value
vibrissae reflex value
prepulse inhibition value
relative neurobehavioral function value
aggressive
anxious
cataleptic
fearful
irritable
respiratory rate value
absolute respiratory rate value
relative respiratory rate value
fecundity value
fertility value
gestational period value
litter size value
female fertility value
hybrid fertility value
male fertility value
absolute litter size value
relative litter size value
cytoplasmic male sterility value
backcross fertility value
cytoplasmic sterility value
f1 fertility value
f2 fertility value
germ line dependent fertility value
intercross fertility value
soma dependent fertility value
backcross fertile
backcross sterile
chinsurah boro type value
cms-hl type value
wild abortive value
f1 fertile
f1 sterile
f2 fertile
f2 sterile
intercross fertile
intercross sterile
qualitative value
continuant
absolute thickness
relative thickness
absolute volume
relative volume
absolute width
relative width
relative enzyme function
absolute enzyme function
intercross fertility
absolute photosensitivity
light intensivity sensitivity
light_quality sensitivity
blue light sensitivity
far red light sensitivity
red light sensitivity
u v light sensitivity
relative photosensitivity
regular shape
irregular shape
absolute activity
opacity value
relative opacity
absolute opacity
relative opacity value
absolute opacity value
symmetry value
albino value
absolute permeability
relative permeability
relative porosity
absolute porosity
permeability value
absolute permeability value
relative permeability value
porosity value
absolute porosity value
relative porosity value
absolute consistency
relative consistency
relative consistency value
absolute consistency value
consistent
inconsistent
relative viscosity
absolute viscosity
viscosity value
absolute viscosity value
relative viscosity value
relative alternation
absolute alternation
alternation value
relative alternation value
absolute alternation value
absolute latency
relative latency
absolute latency value
relative latency value
relative intensity
absolute intensity
relative intensity value
absolute intensity value
absolute occurence
relative occurence
absolute occurence value
relative occurence value
physical quantity
low yield
stiffness
relative life span
absolute life span
ratio
absolute ratio
relative ratio
relative amplitude
absolute amplitude
absolute power
relative power
absolute resistance
relative resistance
absolute susceptibility
relative susceptibility
number
relative acceleration
absolute acceleration
relative efficiency
absolute efficiency
relative elasticity
absolute elasticity
relative flux
absolute flux
relative stiffness
absolute stiffness
absolute strain
relative strain
relative density
absolute density
relative energy
absolute energy
relative impulse
absolute impulse
absolute momentum
relative momentum
absolute pressure
relative pressure
absolute work
relative work
physical measure value
damage value
acceleration value
relative acceleration value
absolute acceleration value
efficiency value
relative efficiency value
absolute efficiency value
elasticity value
absolute elasticity value
relative elasticity value
flux value
relative flux value
absolute flux value
force value
absolute force value
relative force value
absolute force
relative force
position value
stiffness value
absolute stiffness value
relative stiffness value
strain value
absolute strain value
relative strain value
density value
relative amplitude value
absolute amplitude value
absolute density value
relative density value
energy value
absolute energy value
relative energy value
impulse value
relative impulse value
absolute impulse value
momentum value
absolute momentum value
relative momentum value
power value
absolute power value
relative power value
pressure value
absolute pressure value
relative pressure value
work value
absolute work value
relative work value
ratio value
absolute ratio value
relative ratio value
immunoglobulin concentration
ig a concentration
ig d concentration
ig e concentration
ig g concentration
ig m concentration
urine glucose composition
immunoglobulin concentration value
ig a concentration value
ig d concentration value
ig e concentration value
ig g concentration value
ig m concentration value
resistance value
absolute resistance value
relative resistance value
susceptibility value
absolute susceptibility value
relative susceptibility value
absolute concentration
relative concentration
absolute concentration value
relative concentration value
unconcentrated
urine enzyme composition value
urine enzyme composition
numerical value
urine glucose composition value
urine composition
urine composition
deaf
blind
immune
relative response
absolute response
relative response
absolute response value
maturity value
modified direction
unmodified direction
not enlarged
absolute compatability
absolute function
plane_angle_quantity
solid_angle_quantity
length_unit
mass_unit
temparature_unit
time_unit
volume_unit
energy_unit
substance_unit
area_unit
angle_unit
plane_angle_unit
solid_angle_unit
quantitative value
real number
relational number
startle response
dull
cold insensitive
heat insentive
strength value
bright grey
pale grey
left-right symmetry
unknown sex
relative visual threshold value
edematous (sensu botany)
healing value
glutinous
relative width
sugar concentration value
relative enzyme function
relative work value
relaxational quality
enhanced
occurence value
relative consumption
absolute power value
relative auditory threshold value
decreased action potential
increased action potential
cellular polarity
increased relaxation
decreased relaxation
absolute time
life span value
surface shape
post-mortem
pre-mortem
neoplasm disposition
<new term>
quality
qualitative
process quality
physical object quality
bifid
Downloads of PATO
semantics
ontology_def.obo.txt 2013-05-03 04:47:57 278.14KB by-sa
ontology_def.nt.txt 2013-05-03 04:48:08 1.73MB by-sa
ontology_def.owl-rdf.xml 2013-05-03 04:48:08 1.02MB by-sa
ontology_def.ttl.txt 2013-05-03 04:48:08 834.55KB by-sa
table
label_table.tsv.en.SJIS.txt 2013-04-18 04:16:58 260.10KB by-sa
label_table.tsv.en.UTF8.txt 2013-04-18 04:17:09 260.10KB by-sa
label_table.tsv.ja.SJIS.txt 2013-04-18 04:17:20 260.10KB by-sa
label_table.tsv.ja.UTF8.txt 2013-04-18 04:17:31 260.10KB by-sa
Registred Files
CRIA00107S000001_Id.txt 2013-04-24 17:29:28 1.32MB by-sa
CRIA00107S000001_name.txt 2013-04-24 17:29:28 1.53MB by-sa
accMap.obj 2013-04-24 17:29:28 2.67MB by-sa
alleleMap.obj 2013-04-24 17:29:30 155.88MB by-sa
omixml_class_property.xml 2013-04-24 17:29:30 1.69KB by-sa
omixml_strain_instance_1.xml 2013-04-24 17:29:30 8.95MB by-sa
omixml_strain_slink_1.xml 2013-04-24 17:29:32 102.43MB by-sa
omixml_strain_slink_2.xml 2013-04-24 17:29:33 63.32MB by-sa
omixml_strain_slink_3.xml 2013-04-24 17:29:34 46.09MB by-sa
omixml_strain_slink_4.xml 2013-04-24 17:29:34 1.67MB by-sa
stMap.obj 2013-04-24 17:29:34 2.40MB by-sa
termMap.obj 2013-04-24 17:29:34 12.38KB by-sa
Related Disks of PATO
Content of PATO

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Page(s) 1 1 - 3 of 3