Genetics Ontology Lite

Genetics Ontology (GXO) is a middle level ontology to bridge between a top-level ontology, Yet Another More Advanced Top-level Ontology (YAMATO) and experimental genetics domain.
http://www.brc.riken.jp/lab/bpmp/ontology/ontology_gxo.html

See also about YAMATO:
http://www.ei.sanken.osaka-u.ac.jp/hozo/onto_library/upperOnto.htm
Link to original site

Root Class crib23s1i


Announcement
Directory
CHEBI Chemical entities of biological interest
RIKENBASE
Basic Formal Ontology 1.1.1
Genetics Ontology Lite
Root Class
Universal
NCBI Taxonomy
Particular
ARTADE2 predicted gene model database
A.thaliana cDNA
A.thaliana locus
Mouse Ensembl Gene
Bacpedia (Riken Harima SPring8-Center)
Protein Data Bank
Swiss-Prot
Europhenome phenotype experiment database
DS tag line
Cerebellar Development Transcriptome Database
CHEBI Chemical entities of biological interest
FOX Hunting
Mouse Body part (test)
The Rice Gene From RAP-DB
Qualiy and Quantity
RIKEN Cassava Full-Length cDNA Database
Human Ensembl Gene
Researcher
Plant Phosphoproteome Database
HUGO Gene Nomenclature Committee
RIKEN Harima Heavy-atom Database [Data]
MGI Strains and Polymorphisms
SSBC (Systems and Structural Biology Center)
Populus trichocarpa (JGI v1.1)
RIKEN Arabidopsis Activation tagging line
PATO
Entrez Mouse
RIKEN Mouse Phenotype database
Mouse strain in RIKEN BioResource Center
RIKEN Ortholog
Entrez Human
Plant Ontology(Plant Anatomy)
Rat Ensembl Gene
Chimpanzee Ensembl Gene
Dog Ensembl Gene
RIKEN RAFL cDNA
FANTOM eeDB
Mammalian Ortholog
FANTOM4
Plant Phenome
RIKEN Plant gene family
The RIKEN integrated database of mammals
RIKEN ENU Mouse Lines
Genome Sequence
Integrated Mouse Phenotype Database
RIKEN Phenome Integration of Arabidopsis mutants
The integrated database of plant omics data
Plant Ontology(Plant Structure Development Stage)
Institute (Japan)
Integrated Database of Protein Experiments and Structures
FIX (Physico-chemical methods and properties)
RIKEN RARGE Alternative Splicing
Plant Trait Ontology
RefSeq Human
RefSeq Mouse
Selaginella moellendorffii gene
Plant Environment Ontology
Vitis vinifera gene
Mouse Clinic protocol
RIKEN disease model mice
Experimental supplies
RIKEN Protein Database
RIKEN RARGE Promoter
Mouse Phenoyping experiment template
Experimental analysis
Phenotyping Experiment Template
RIKEN PSC Tilling Array
Mouse Resource DB Cooperation
RSGI
Contents of Genetics Ontology Lite
Page(s) 1 1 - 1 of 1
Root Class
Last update: 2009-04-02
Page(s) 1 1 - 1 of 1

Weekly Access Rank for All Databases
Top50 2013-05-19 to 2013-05-25

Weekly RankingDatabase NameTrendOrganization
1Cell lines in RIKEN BioResource Center
 
up
BRC
2Researcher
 
down
BASE
3NCBI Taxonomy
 
up
NCBI
4Mouse strain in RIKEN BioResource Center
 
down
BRC
5Scientific Journals
 
up
NCBI
6RIKENBASE
 
unch.
BASE
7A.thaliana locus
 
up
TAIR
8mammalian phenotype ontology
 
up
OBO
9PDF File Repository
 
down
BASE
10RIKEN Organization
 
down
 
11Mouse MGI Gene
 
down
MGI
12OMIM
 
down
NCBI
13Human Ensembl Gene
 
up
Ensembl
14Literature repository
 
down
 
15Protein Data Bank
 
up
RCSB
16ARTADE2 predicted gene model database
 
up
BASE
17InterPro
 
up
EBI
18MGI Alleles
 
up
MGI
19Biological property data of cell line
 
up
BRC
20RIKEN Press Releases
 
down
RIKEN
21RIKEN Phenome Integration of Arabidopsis mutants
 
down
BASE
22The RIKEN integrated database of mammals
 
down
BASE ,BRC
23DatabaseRegistry
 
down
BASE
24Plant Phenome
 
up
PSC,BASE
25Mouse Ensembl Gene
 
down
Ensembl
26CHEBI Chemical entities of biological interest
 
unch.
OBO
27References in RIKEN BioResource Center
 
down
BRC
28FOX Hunting
 
up
BASE ,PSC
29Bacpedia (Riken Harima SPring8-Center)
 
down
RSC
30HP Human phenotype ontology
 
up
OBO
31SSBC (Systems and Structural Biology Center)
 
down
SSBC,RSGI
32Swiss-Prot
 
up
EBI
33Promoter collection for genome design
 
up
BASE
34MGI Strains and Polymorphisms
 
down
MGI
35The Rice Gene From RAP-DB
 
unch.
RAP
36Protein Modification (MOD)
 
down
 
37GenoCon 2010
 
down
BASE
38The integrated database of plant omics data
 
up
PSC, BASE
39Sequence Design Project
 
unch.
 
40animation repository
 
up
RIKEN
41A.thaliana cDNA
 
down
PSC, BASE
42Entrez Human
 
up
NCBI
43DS tag line
 
up
BRC
44Gene Ontology
 
down
GO
45TIGR(The International Rice Genome)/MSU(Michigan State University)
 
up
TIGR
46Type project
 
up
BRC
47Symposium & Seminar
 
up
 
48RIKEN Mouse Phenotype database
 
up
BRC
49HUGO Gene Nomenclature Committee
 
down
HUGO
50DNA in RIKEN BioResource Center
 
up
BRC
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